Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm22849-201ENSMUST00000157713 307 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm26041-201ENSMUST00000158148 108 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm24897-201ENSMUST00000179033 107 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm23190-201ENSMUST00000180307 64 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm27330-201ENSMUST00000184689 132 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm27505-201ENSMUST00000185071 110 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm29192-201ENSMUST00000190942 377 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm31230-201ENSMUST00000199725 785 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm44903-201ENSMUST00000206840 130 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.51□□□□□ -2.01
Cd40lgP27548 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm5471-201ENSMUST00000072732 337 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cd40lgP27548 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Mir21a-201ENSMUST00000083521 92 ntBASIC2.51□□□□□ -2.01
Cd40lgP27548 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cd40lgP27548 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm25466-201ENSMUST00000103995 132 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm13541-201ENSMUST00000119519 283 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm11357-201ENSMUST00000119758 954 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm15112-201ENSMUST00000120152 860 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm14867-201ENSMUST00000120156 866 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm25294-201ENSMUST00000122791 104 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm23599-201ENSMUST00000157261 251 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm26214-201ENSMUST00000158581 107 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm16289-201ENSMUST00000162079 183 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm17166-201ENSMUST00000172006 431 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Mir5129-201ENSMUST00000174938 78 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm18396-201ENSMUST00000177095 361 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm23568-201ENSMUST00000177960 92 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm23269-201ENSMUST00000178701 107 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm24829-201ENSMUST00000179245 92 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm19257-201ENSMUST00000186121 183 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Cd40lgP27548 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm28650-201ENSMUST00000188413 411 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm38154-201ENSMUST00000195444 340 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm32222-201ENSMUST00000203296 298 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm45173-201ENSMUST00000206819 305 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cd40lgP27548 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.5□□□□□ -2.01
Cd40lgP27548 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm7984-201ENSMUST00000060640 538 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Snora23-201ENSMUST00000082517 184 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Cd40lgP27548 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.5□□□□□ -2.01
Cd40lgP27548 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cd40lgP27548 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm24068-201ENSMUST00000104513 132 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm14594-201ENSMUST00000118052 537 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm14602-201ENSMUST00000118625 340 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm14590-201ENSMUST00000118934 537 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm12787-201ENSMUST00000119234 396 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm12793-201ENSMUST00000119268 292 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm12825-201ENSMUST00000120249 563 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm7327-201ENSMUST00000120925 652 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.49□□□□□ -2.01
Cd40lgP27548 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm24443-201ENSMUST00000157242 132 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm24910-201ENSMUST00000157289 272 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm22141-201ENSMUST00000157403 277 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm23409-201ENSMUST00000158516 237 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm24552-201ENSMUST00000158646 103 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm25365-201ENSMUST00000158852 121 ntBASIC2.49□□□□□ -2.01
Cd40lgP27548 Gm25451-201ENSMUST00000177832 121 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 124.5 ms