Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cdx1P18111 Gm28241-201ENSMUST00000190916 235 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm28504-201ENSMUST00000190977 666 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm31511-201ENSMUST00000193134 657 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm35843-201ENSMUST00000193716 666 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm36728-201ENSMUST00000195782 665 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm24350-202ENSMUST00000198309 132 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm31520-201ENSMUST00000203048 733 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.22□□□□□ -2.05
Cdx1P18111 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cdx1P18111 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cdx1P18111 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.22□□□□□ -2.05
Cdx1P18111 Mir184-201ENSMUST00000083662 69 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm22866-201ENSMUST00000083947 177 ntBASIC2.22□□□□□ -2.05
Cdx1P18111 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.22□□□□□ -2.05
Cdx1P18111 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cdx1P18111 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Cdx1P18111 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Cdx1P18111 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdx1P18111 Gm13349-201ENSMUST00000118436 411 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm11813-201ENSMUST00000118586 291 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm15760-201ENSMUST00000119553 283 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm11229-201ENSMUST00000121993 437 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm24840-201ENSMUST00000122603 147 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.21□□□□□ -2.06
Cdx1P18111 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.21□□□□□ -2.06
Cdx1P18111 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.21□□□□□ -2.06
Cdx1P18111 Gm26105-201ENSMUST00000157253 190 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm28358-202ENSMUST00000189292 223 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm20776-201ENSMUST00000189940 700 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Mir7118-201ENSMUST00000197760 61 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm5317-201ENSMUST00000204445 847 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Gm45551-201ENSMUST00000211459 928 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.21□□□□□ -2.06
Cdx1P18111 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Cdx1P18111 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Cdx1P18111 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.2□□□□□ -2.06
Cdx1P18111 Gm13913-201ENSMUST00000121126 260 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.2□□□□□ -2.06
Cdx1P18111 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Cdx1P18111 Gm22483-201ENSMUST00000157986 274 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Gm22330-201ENSMUST00000158068 115 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Cdx1P18111 Gm17038-201ENSMUST00000166586 494 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Mir8118-201ENSMUST00000183962 129 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.2□□□□□ -2.06
Cdx1P18111 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.2□□□□□ -2.06
Cdx1P18111 Gm44966-201ENSMUST00000208096 157 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cdx1P18111 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.2□□□□□ -2.06
Cdx1P18111 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Cdx1P18111 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Cdx1P18111 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Cdx1P18111 Gm15497-201ENSMUST00000119137 551 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm14588-201ENSMUST00000119895 172 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm12723-201ENSMUST00000120700 451 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm22452-201ENSMUST00000122804 104 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm17187-201ENSMUST00000164622 410 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Mir3103-201ENSMUST00000175474 67 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm26061-201ENSMUST00000175584 108 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm20648-201ENSMUST00000175815 328 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm27505-201ENSMUST00000185071 110 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm28439-201ENSMUST00000187714 876 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm7837-201ENSMUST00000190873 412 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm6140-201ENSMUST00000192494 966 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm42958-201ENSMUST00000197595 318 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm8041-201ENSMUST00000199755 616 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm32222-201ENSMUST00000203296 298 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm18000-201ENSMUST00000212153 800 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Cdx1P18111 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.19□□□□□ -2.06
Cdx1P18111 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Cdx1P18111 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Cdx1P18111 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Cdx1P18111 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms