Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Msx1P13297 Gm42774-201ENSMUST00000198854 283 ntBASIC4.76□□□□□ -1.65
Msx1P13297 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Msx1P13297 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Msx1P13297 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Msx1P13297 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.76□□□□□ -1.65
Msx1P13297 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.76□□□□□ -1.65
Msx1P13297 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Msx1P13297 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.75□□□□□ -1.65
Msx1P13297 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Msx1P13297 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Msx1P13297 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Msx1P13297 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Msx1P13297 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Msx1P13297 Gm15772-201ENSMUST00000118533 438 ntBASIC4.75□□□□□ -1.65
Msx1P13297 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Gm12854-201ENSMUST00000128518 297 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Gm24217-201ENSMUST00000158260 133 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Gm22326-201ENSMUST00000158897 351 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Gm2862-201ENSMUST00000161524 328 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Gm28755-201ENSMUST00000185773 199 ntBASIC4.75□□□□□ -1.65
Msx1P13297 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Gm7665-201ENSMUST00000076710 297 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.75□□□□□ -1.65
Msx1P13297 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Msx1P13297 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Msx1P13297 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msx1P13297 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Msx1P13297 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Msx1P13297 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Msx1P13297 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.74□□□□□ -1.65
Msx1P13297 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Msx1P13297 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Msx1P13297 Gm25089-201ENSMUST00000102015 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm14881-201ENSMUST00000120366 372 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm12926-201ENSMUST00000121158 409 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm24726-201ENSMUST00000158232 121 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm22139-201ENSMUST00000158747 105 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm25840-201ENSMUST00000177821 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm24952-201ENSMUST00000177909 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm23682-201ENSMUST00000178146 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm24652-201ENSMUST00000178223 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm22629-201ENSMUST00000178272 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm24021-201ENSMUST00000178435 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm22274-201ENSMUST00000178441 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm22050-201ENSMUST00000178442 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm23688-201ENSMUST00000178502 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm23944-201ENSMUST00000178607 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm26283-201ENSMUST00000178625 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm25452-201ENSMUST00000178776 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm23286-201ENSMUST00000178963 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm22640-201ENSMUST00000179035 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm25984-201ENSMUST00000179129 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm25585-201ENSMUST00000179469 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm26374-201ENSMUST00000179737 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm24040-201ENSMUST00000179786 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm25017-201ENSMUST00000179805 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm23618-201ENSMUST00000179912 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm26284-201ENSMUST00000180107 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm24570-201ENSMUST00000180314 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm24654-201ENSMUST00000180315 79 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm27220-201ENSMUST00000183453 262 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm37923-201ENSMUST00000191624 161 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.74□□□□□ -1.65
Msx1P13297 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.74□□□□□ -1.65
Msx1P13297 Gm5876-201ENSMUST00000203735 243 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm40810-201ENSMUST00000219149 253 ntBASIC4.74□□□□□ -1.65
Msx1P13297 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm8508-201ENSMUST00000061226 363 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm23264-201ENSMUST00000083372 107 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.74□□□□□ -1.65
Msx1P13297 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Msx1P13297 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Msx1P13297 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Msx1P13297 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Msx1P13297 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.73□□□□□ -1.65
Msx1P13297 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Msx1P13297 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Msx1P13297 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.73□□□□□ -1.65
Msx1P13297 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Msx1P13297 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Msx1P13297 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Msx1P13297 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Msx1P13297 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms