Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.93□□□□□ -2.1
Col5a1O88207 Gm24237-201ENSMUST00000157790 132 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm23642-201ENSMUST00000157858 258 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm23583-201ENSMUST00000158533 289 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm24875-201ENSMUST00000158888 104 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm7346-201ENSMUST00000169661 476 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm27659-201ENSMUST00000183472 98 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm29597-201ENSMUST00000188035 308 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC1.93□□□□□ -2.1
Col5a1O88207 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC1.93□□□□□ -2.1
Col5a1O88207 Gm43954-201ENSMUST00000204634 544 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm45912-201ENSMUST00000210646 543 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Col5a1O88207 Gm45965-201ENSMUST00000221192 1284 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC1.93□□□□□ -2.1
Col5a1O88207 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Col5a1O88207 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Col5a1O88207 Gm25582-201ENSMUST00000083412 110 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Col5a1O88207 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col5a1O88207 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.93□□□□□ -2.1
Col5a1O88207 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
Col5a1O88207 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
Col5a1O88207 Gm15714-201ENSMUST00000117168 250 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm11252-201ENSMUST00000120572 939 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm22345-201ENSMUST00000122644 107 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm22794-201ENSMUST00000157228 306 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm24965-201ENSMUST00000157922 106 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Col5a1O88207 Gm5929-201ENSMUST00000166883 487 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC1.92□□□□□ -2.1
Col5a1O88207 Gm27326-201ENSMUST00000183504 95 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm28412-201ENSMUST00000187243 177 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm29107-201ENSMUST00000190910 347 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm38149-201ENSMUST00000191943 339 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Col5a1O88207 Gm42958-201ENSMUST00000197595 318 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.92□□□□□ -2.1
Col5a1O88207 Gm9628-201ENSMUST00000222169 725 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 AC170086.1-201ENSMUST00000225190 497 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.92□□□□□ -2.1
Col5a1O88207 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Col5a1O88207 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Col5a1O88207 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Col5a1O88207 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Col5a1O88207 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col5a1O88207 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Col5a1O88207 Gm15846-201ENSMUST00000116022 320 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm22072-201ENSMUST00000116850 121 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm8858-201ENSMUST00000118259 342 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm12016-201ENSMUST00000119079 681 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm11890-201ENSMUST00000119585 417 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.91□□□□□ -2.1
Col5a1O88207 Gm6395-201ENSMUST00000167639 691 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm20648-201ENSMUST00000175815 328 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Mir6901-201ENSMUST00000185062 62 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col5a1O88207 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.91□□□□□ -2.1
Col5a1O88207 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Col5a1O88207 Gm28648-201ENSMUST00000190092 343 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col5a1O88207 Gm37219-201ENSMUST00000192036 926 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC1.91□□□□□ -2.1
Col5a1O88207 Gm44058-201ENSMUST00000204335 467 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.91□□□□□ -2.1
Col5a1O88207 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col5a1O88207 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Col5a1O88207 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Col5a1O88207 Gm11898-201ENSMUST00000117161 385 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm13087-201ENSMUST00000118298 256 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm15030-201ENSMUST00000119804 484 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm5646-201ENSMUST00000120568 714 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm14360-201ENSMUST00000120670 393 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm9225-201ENSMUST00000121921 836 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm14907-201ENSMUST00000121948 854 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm23317-201ENSMUST00000157999 129 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm22159-201ENSMUST00000158412 130 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm26915-201ENSMUST00000183080 748 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Trbv22-201ENSMUST00000191697 291 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Gm43582-201ENSMUST00000196149 343 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.91□□□□□ -2.1
Col5a1O88207 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.91□□□□□ -2.1
Col5a1O88207 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms