Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm24067-201ENSMUST00000104514 85 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm11366-201ENSMUST00000119279 429 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm5123-201ENSMUST00000121905 837 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm24629-201ENSMUST00000122762 89 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm5755-201ENSMUST00000152394 837 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm16060-201ENSMUST00000153140 478 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm26045-201ENSMUST00000157862 97 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm22098-201ENSMUST00000157930 85 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm26034-201ENSMUST00000158154 116 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm27940-201ENSMUST00000184449 98 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm45315-201ENSMUST00000209283 333 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm45296-201ENSMUST00000209625 205 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 AC124549.1-201ENSMUST00000225912 333 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm26066-201ENSMUST00000083385 109 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm23875-201ENSMUST00000083711 318 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Pcdh1F7BJK1 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm23578-201ENSMUST00000103943 104 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm22272-201ENSMUST00000104039 134 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm22778-201ENSMUST00000104090 128 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm15180-201ENSMUST00000117745 492 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm11633-201ENSMUST00000118176 444 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm14541-201ENSMUST00000118985 157 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm13873-201ENSMUST00000119208 427 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm12155-201ENSMUST00000121267 160 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm14768-201ENSMUST00000122126 678 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm23638-201ENSMUST00000175073 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm23158-201ENSMUST00000175076 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm22907-201ENSMUST00000175198 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm22625-201ENSMUST00000175382 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm22875-201ENSMUST00000175449 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm25197-201ENSMUST00000175516 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm27857-201ENSMUST00000176930 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm26268-201ENSMUST00000177685 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm23681-201ENSMUST00000178821 126 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Mir6938-201ENSMUST00000184173 63 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Mir8106-201ENSMUST00000184520 139 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm28921-201ENSMUST00000190219 378 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm7182-201ENSMUST00000193351 732 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Trbv11-201ENSMUST00000194354 260 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm44473-201ENSMUST00000204039 152 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm45513-201ENSMUST00000210228 376 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Gm45859-201ENSMUST00000212794 214 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Snord21-201ENSMUST00000082519 94 ntBASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.84□□□□□ -1.79
Pcdh1F7BJK1 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Pcdh1F7BJK1 Gm650-201ENSMUST00000144428 1551 ntBASIC3.84□□□□□ -1.8
Pcdh1F7BJK1 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Pcdh1F7BJK1 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Pcdh1F7BJK1 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Pcdh1F7BJK1 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms