Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Col6a3E9PWQ3 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
Col6a3E9PWQ3 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Gm11582-201ENSMUST00000121041 236 ntBASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Gm23335-201ENSMUST00000117021 90 ntBASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Gm38044-201ENSMUST00000192964 487 ntBASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Mir365-2-201ENSMUST00000083555 112 ntBASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col6a3E9PWQ3 BC051076-202ENSMUST00000199477 2868 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm25378-201ENSMUST00000104333 129 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm22386-201ENSMUST00000158192 129 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm27155-201ENSMUST00000183716 898 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm37987-201ENSMUST00000194999 825 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm17990-201ENSMUST00000211728 553 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Snord14d-201ENSMUST00000083424 86 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm24632-201ENSMUST00000122770 323 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm29658-201ENSMUST00000185404 230 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 AC123064.2-201ENSMUST00000217758 193 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm12782-201ENSMUST00000117519 727 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm13913-201ENSMUST00000121126 260 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm22136-201ENSMUST00000158751 268 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC1.23□□□□□ -2.21
Col6a3E9PWQ3 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm14879-201ENSMUST00000117308 507 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm5967-201ENSMUST00000172723 494 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm27980-201ENSMUST00000184094 169 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm44845-201ENSMUST00000208773 335 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm26493-201ENSMUST00000083155 136 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm14815-201ENSMUST00000120060 488 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm15267-201ENSMUST00000120888 464 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm24783-201ENSMUST00000157639 100 ntBASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Col6a3E9PWQ3 Gm14491-201ENSMUST00000121919 199 ntBASIC1.21□□□□□ -2.21
Col6a3E9PWQ3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC1.21□□□□□ -2.21
Col6a3E9PWQ3 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.21□□□□□ -2.21
Col6a3E9PWQ3 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.21□□□□□ -2.21
Col6a3E9PWQ3 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Gm3027-201ENSMUST00000167579 451 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Gm45742-201ENSMUST00000212400 433 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Gm14835-201ENSMUST00000119039 315 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Gm38332-201ENSMUST00000194189 147 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Gm25079-201ENSMUST00000082529 203 ntBASIC1.21□□□□□ -2.22
Col6a3E9PWQ3 Gm11386-201ENSMUST00000117761 347 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm23470-201ENSMUST00000157129 120 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm20915-201ENSMUST00000191575 663 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm6461-201ENSMUST00000120015 633 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm13366-201ENSMUST00000122198 970 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm28151-201ENSMUST00000189404 951 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm43944-201ENSMUST00000205220 120 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm24920-201ENSMUST00000083018 85 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm13355-201ENSMUST00000117996 317 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm16546-201ENSMUST00000159442 355 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm9830-201ENSMUST00000178509 357 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm44634-201ENSMUST00000206119 152 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Mir27b-201ENSMUST00000083541 73 ntBASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Col6a3E9PWQ3 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 Gm24690-201ENSMUST00000157759 97 ntBASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 Mir6389-201ENSMUST00000183661 102 ntBASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 Gm29281-201ENSMUST00000188077 381 ntBASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 Ear14-201ENSMUST00000049559 468 ntBASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms