Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.08□□□□□ -2.24
Col6a5A6H584 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.08□□□□□ -2.24
Col6a5A6H584 Gm16976-205ENSMUST00000227324 226 ntBASIC1.08□□□□□ -2.24
Col6a5A6H584 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
Col6a5A6H584 Gm25796-201ENSMUST00000082645 163 ntBASIC1.08□□□□□ -2.24
Col6a5A6H584 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.08□□□□□ -2.24
Col6a5A6H584 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm14927-201ENSMUST00000120283 454 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm25279-201ENSMUST00000122608 133 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm44076-201ENSMUST00000203072 520 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Col6a5A6H584 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm15282-201ENSMUST00000117707 300 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm14039-201ENSMUST00000118705 101 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm13194-201ENSMUST00000142299 311 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm22858-201ENSMUST00000174972 76 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm24258-201ENSMUST00000083739 133 ntBASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Col6a5A6H584 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Col6a5A6H584 Gm15951-201ENSMUST00000118377 400 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm26171-201ENSMUST00000158422 131 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm22304-201ENSMUST00000082688 129 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm23040-201ENSMUST00000083869 163 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Col6a5A6H584 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm9009-201ENSMUST00000117321 326 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Snora24-201ENSMUST00000174989 130 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm6801-201ENSMUST00000190697 339 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm37319-201ENSMUST00000193500 636 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm43954-201ENSMUST00000204634 544 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm18598-201ENSMUST00000207724 597 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm18892-201ENSMUST00000217628 881 ntBASIC1.06□□□□□ -2.24
Col6a5A6H584 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Col6a5A6H584 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Col6a5A6H584 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Col6a5A6H584 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Col6a5A6H584 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.06□□□□□ -2.24
Col6a5A6H584 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Mir1197-201ENSMUST00000117037 120 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm29604-201ENSMUST00000187176 163 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm45445-201ENSMUST00000209586 232 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.05□□□□□ -2.24
Col6a5A6H584 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Col6a5A6H584 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm13640-201ENSMUST00000118445 264 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm11891-201ENSMUST00000121241 619 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm15281-201ENSMUST00000125181 351 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm15275-201ENSMUST00000154752 347 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm23558-201ENSMUST00000157823 80 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm22431-201ENSMUST00000158545 107 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm5967-201ENSMUST00000172723 494 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm20386-201ENSMUST00000174010 132 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm19932-201ENSMUST00000177033 313 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm27580-201ENSMUST00000183666 149 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm37997-201ENSMUST00000193515 267 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm36954-201ENSMUST00000195362 363 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm44666-201ENSMUST00000208544 391 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.05□□□□□ -2.24
Col6a5A6H584 AC154270.1-201ENSMUST00000227226 426 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Col6a5A6H584 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.05□□□□□ -2.24
Col6a5A6H584 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Col6a5A6H584 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm12448-201ENSMUST00000118852 655 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm12934-201ENSMUST00000119221 343 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm27155-201ENSMUST00000183716 898 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm27980-201ENSMUST00000184094 169 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm29597-201ENSMUST00000188035 308 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm29281-201ENSMUST00000188077 381 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.04□□□□□ -2.24
Col6a5A6H584 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm9318-201ENSMUST00000222444 438 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Col6a5A6H584 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Col6a5A6H584 Mir574-201ENSMUST00000103854 78 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm13614-201ENSMUST00000117306 503 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm13366-201ENSMUST00000122198 970 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm24174-201ENSMUST00000158933 111 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.04□□□□□ -2.24
Col6a5A6H584 Gm16261-201ENSMUST00000096813 205 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Col6a5A6H584 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.04□□□□□ -2.24
Col6a5A6H584 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Col6a5A6H584 Gm2348-201ENSMUST00000108782 300 ntBASIC1.03□□□□□ -2.24
Col6a5A6H584 n-R5s155-201ENSMUST00000122531 113 ntBASIC1.03□□□□□ -2.24
Col6a5A6H584 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.03□□□□□ -2.24
Col6a5A6H584 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.03□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms