Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm38332-201ENSMUST00000194189 147 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm32222-201ENSMUST00000203296 298 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm18921-201ENSMUST00000221798 366 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm23042-201ENSMUST00000083866 101 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm24031-201ENSMUST00000083930 131 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm25821-201ENSMUST00000093657 133 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm8995-201ENSMUST00000184842 7280 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm37848-201ENSMUST00000195288 3103 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm26500-201ENSMUST00000101867 106 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Mir465b-1-201ENSMUST00000103940 79 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Mir465b-2-201ENSMUST00000104662 79 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm16128-201ENSMUST00000117855 626 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm15223-201ENSMUST00000120989 826 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm25390-201ENSMUST00000157341 103 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm26347-201ENSMUST00000157526 131 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm24751-201ENSMUST00000157844 102 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm26034-201ENSMUST00000158154 116 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm25923-201ENSMUST00000158312 138 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm24001-201ENSMUST00000158463 85 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm25654-201ENSMUST00000158467 88 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm24664-201ENSMUST00000158939 100 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm17186-201ENSMUST00000171742 456 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Mir7056-201ENSMUST00000183776 59 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm7468-201ENSMUST00000203900 652 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm19790-201ENSMUST00000214414 251 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm22806-201ENSMUST00000082738 136 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Gm22353-201ENSMUST00000083918 136 ntBASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm23709-201ENSMUST00000104364 130 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Mir294-201ENSMUST00000104710 84 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm13232-201ENSMUST00000121816 632 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm22984-201ENSMUST00000122751 122 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm22447-201ENSMUST00000158155 92 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm20651-201ENSMUST00000177219 329 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm8599-201ENSMUST00000193033 457 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm32175-201ENSMUST00000193641 346 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm44533-201ENSMUST00000207782 268 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 AC147545.1-201ENSMUST00000227528 108 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm22744-201ENSMUST00000083444 65 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Neat1-201ENSMUST00000173672 20771 ntBASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Prpf40aQ9R1C7 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm37899-201ENSMUST00000193116 8717 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm13729-201ENSMUST00000120328 406 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm24251-201ENSMUST00000157324 114 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm26312-201ENSMUST00000157769 165 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm27585-201ENSMUST00000183717 199 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm19503-201ENSMUST00000187109 241 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Ighv1-46-201ENSMUST00000193988 351 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm44030-201ENSMUST00000204865 432 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm45007-201ENSMUST00000206237 366 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm44879-201ENSMUST00000207007 503 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 AC105958.2-201ENSMUST00000214167 191 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm7422-201ENSMUST00000220115 640 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm5596-201ENSMUST00000207988 2421 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.02□□□□□ -1.61
Prpf40aQ9R1C7 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms