Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm43604-201ENSMUST00000199799 705 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm44108-201ENSMUST00000203525 422 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm14914-201ENSMUST00000117576 2031 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm22657-201ENSMUST00000104197 132 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm22899-201ENSMUST00000104540 131 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm12261-201ENSMUST00000117499 645 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm13155-201ENSMUST00000119277 646 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm8178-201ENSMUST00000121570 646 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm9003-201ENSMUST00000121810 482 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm24507-201ENSMUST00000157683 134 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm22476-201ENSMUST00000158902 100 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm17067-202ENSMUST00000180131 123 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Mir6400-201ENSMUST00000184870 92 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm29167-201ENSMUST00000190024 377 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm43524-201ENSMUST00000197278 298 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm4714-201ENSMUST00000203395 279 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.73□□□□□ -1.65
Nubp1Q9R060 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nubp1Q9R060 CU062626.2-201ENSMUST00000223953 274 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm26456-201ENSMUST00000082831 111 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Gm23464-201ENSMUST00000083145 147 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nubp1Q9R060 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.73□□□□□ -1.65
Nubp1Q9R060 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Nubp1Q9R060 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm24429-201ENSMUST00000104076 132 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm24469-201ENSMUST00000104487 131 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Mir1193-201ENSMUST00000116761 121 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm23492-201ENSMUST00000116837 115 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm14215-201ENSMUST00000120578 221 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm12926-201ENSMUST00000121158 409 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Mir1945-201ENSMUST00000157919 78 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm27754-201ENSMUST00000183340 126 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm29603-201ENSMUST00000186792 334 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm8874-201ENSMUST00000196826 286 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm43408-201ENSMUST00000198263 440 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm44182-201ENSMUST00000204052 115 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm24706-201ENSMUST00000082806 137 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm24163-201ENSMUST00000093660 132 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nubp1Q9R060 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nubp1Q9R060 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Nubp1Q9R060 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Nubp1Q9R060 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.71□□□□□ -1.65
Nubp1Q9R060 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Nubp1Q9R060 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC4.71□□□□□ -1.65
Nubp1Q9R060 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nubp1Q9R060 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm24276-201ENSMUST00000102181 110 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm26293-201ENSMUST00000104170 84 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm8145-201ENSMUST00000118220 745 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms