Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm22656-201ENSMUST00000104199 171 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm24889-201ENSMUST00000104388 132 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm8217-201ENSMUST00000119136 465 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm12806-201ENSMUST00000119384 268 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm12515-201ENSMUST00000120116 361 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm14736-201ENSMUST00000121470 336 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm15147-201ENSMUST00000122263 483 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm23231-201ENSMUST00000157299 104 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm22849-201ENSMUST00000157713 307 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm24419-201ENSMUST00000157875 332 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm26215-201ENSMUST00000158584 139 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm23415-201ENSMUST00000175519 83 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm27385-201ENSMUST00000184747 104 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm27490-201ENSMUST00000184754 128 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28030-201ENSMUST00000184987 138 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Mir6372-201ENSMUST00000185114 109 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Gm37431-201ENSMUST00000195102 111 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm13046-201ENSMUST00000117391 501 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm14890-201ENSMUST00000117660 676 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm14868-201ENSMUST00000117840 216 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm14307-201ENSMUST00000118930 291 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm12787-201ENSMUST00000119234 396 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm14694-201ENSMUST00000121856 282 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm23887-201ENSMUST00000122683 172 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm14297-201ENSMUST00000129110 291 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm21673-201ENSMUST00000186640 436 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm21135-201ENSMUST00000189023 436 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm19498-201ENSMUST00000191128 331 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm28724-202ENSMUST00000194218 295 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm37523-201ENSMUST00000194901 412 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm44391-201ENSMUST00000198490 93 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm44399-201ENSMUST00000205043 226 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm24623-201ENSMUST00000082616 194 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm26055-201ENSMUST00000083038 107 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.52□□□□□ -1.85
Nkx2-4Q9EQM3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm13504-201ENSMUST00000117490 316 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm11582-201ENSMUST00000121041 236 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm28506-201ENSMUST00000189937 150 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm20102-201ENSMUST00000222445 220 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 CT025602.1-201ENSMUST00000227281 382 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm23627-201ENSMUST00000082459 107 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm22502-201ENSMUST00000082488 107 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm22977-201ENSMUST00000082615 107 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm24149-201ENSMUST00000082757 107 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Gm26111-201ENSMUST00000083969 106 ntBASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Nkx2-4Q9EQM3 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Nkx2-4Q9EQM3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Nkx2-4Q9EQM3 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.5□□□□□ -1.85
Nkx2-4Q9EQM3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Nkx2-4Q9EQM3 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms