Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm11384-201ENSMUST00000121376 303 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm7618-201ENSMUST00000121643 171 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm11363-201ENSMUST00000121672 548 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm26149-201ENSMUST00000157432 108 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm23902-201ENSMUST00000157571 134 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm22156-201ENSMUST00000158409 141 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm26214-201ENSMUST00000158581 107 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm22448-201ENSMUST00000179254 107 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm37431-201ENSMUST00000195102 111 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm44256-201ENSMUST00000203304 335 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm44261-201ENSMUST00000203337 209 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm44055-201ENSMUST00000204376 247 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm44223-201ENSMUST00000204854 114 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm45395-201ENSMUST00000209891 559 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm2710-201ENSMUST00000073196 603 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm23302-201ENSMUST00000082710 100 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Upf1Q9EPU0 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Upf1Q9EPU0 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
Upf1Q9EPU0 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Upf1Q9EPU0 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Upf1Q9EPU0 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Mir879-201ENSMUST00000104703 76 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Gm24552-201ENSMUST00000158646 103 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Gm29218-205ENSMUST00000190846 615 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Mir3970-201ENSMUST00000199287 90 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Mir7227-201ENSMUST00000200408 59 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 AC115291.1-201ENSMUST00000226803 258 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Gm25801-201ENSMUST00000082638 106 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Upf1Q9EPU0 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm14541-201ENSMUST00000118985 157 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm12924-201ENSMUST00000121747 318 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm25290-201ENSMUST00000122796 144 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm10059-201ENSMUST00000131139 171 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm23542-201ENSMUST00000158208 96 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Mir6338-201ENSMUST00000183389 109 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm17811-201ENSMUST00000206193 387 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm44655-201ENSMUST00000207768 423 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm18453-201ENSMUST00000208000 626 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 AC239878.2-201ENSMUST00000224048 464 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm24533-201ENSMUST00000083138 196 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm22155-201ENSMUST00000083836 162 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Gm24817-201ENSMUST00000093672 105 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.64□□□□□ -1.67
Upf1Q9EPU0 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Gm6274-201ENSMUST00000118173 797 ntBASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Gm13153-201ENSMUST00000120969 637 ntBASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Gm22073-201ENSMUST00000122668 189 ntBASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Gm8114-201ENSMUST00000172225 484 ntBASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Gm26400-201ENSMUST00000175012 85 ntBASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.63□□□□□ -1.67
Upf1Q9EPU0 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Upf1Q9EPU0 Gm43914-201ENSMUST00000203592 594 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms