Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm23068-201ENSMUST00000158239 293 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm10075-201ENSMUST00000162030 545 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm25748-201ENSMUST00000175487 70 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm22910-201ENSMUST00000178568 132 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm29216-201ENSMUST00000187117 492 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm8023-201ENSMUST00000195298 903 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm42622-201ENSMUST00000197229 355 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm42621-201ENSMUST00000198114 275 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm44927-201ENSMUST00000207573 716 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm44657-201ENSMUST00000208568 450 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm23738-201ENSMUST00000082828 171 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Mir101b-201ENSMUST00000083622 97 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Mir1193-201ENSMUST00000116761 121 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm6568-201ENSMUST00000122274 697 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm14562-201ENSMUST00000129885 543 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm24914-201ENSMUST00000157285 313 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm20698-201ENSMUST00000175657 233 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm22633-201ENSMUST00000179834 107 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm24518-201ENSMUST00000180275 94 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Mir6405-201ENSMUST00000184584 124 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Mir6363-201ENSMUST00000184880 114 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm37658-201ENSMUST00000192672 315 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm8747-201ENSMUST00000195392 751 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm43039-201ENSMUST00000202883 963 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Crs-ps-201ENSMUST00000203723 760 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm45588-201ENSMUST00000211213 630 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3□□□□□ -1.93
Ddx28Q9CWT6 CT025526.1-201ENSMUST00000217327 267 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 AC153141.1-201ENSMUST00000218636 501 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 AC116589.7-201ENSMUST00000221061 239 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 AC164117.1-201ENSMUST00000221726 239 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 AC162857.1-201ENSMUST00000226614 400 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 AC108416.2-201ENSMUST00000226792 367 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm22974-201ENSMUST00000083301 103 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm42659-201ENSMUST00000196955 1754 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3□□□□□ -1.93
Ddx28Q9CWT6 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm12878-201ENSMUST00000118744 332 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm12803-201ENSMUST00000118907 821 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm12053-201ENSMUST00000119022 252 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm14877-201ENSMUST00000119803 478 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm11785-201ENSMUST00000120165 601 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm14845-201ENSMUST00000121259 306 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm25391-201ENSMUST00000157342 134 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm24314-201ENSMUST00000158274 123 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm8207-201ENSMUST00000171204 502 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm17186-201ENSMUST00000171742 456 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Mir6341-201ENSMUST00000183490 121 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Mir6413-201ENSMUST00000184049 108 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm29064-201ENSMUST00000187014 813 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Trbv24-201ENSMUST00000194614 347 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm8041-201ENSMUST00000199755 616 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm44030-201ENSMUST00000204865 432 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm39147-201ENSMUST00000211376 465 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm18774-201ENSMUST00000218269 601 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm24533-201ENSMUST00000083138 196 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm25411-201ENSMUST00000083760 151 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm23850-201ENSMUST00000083830 169 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm10161-201ENSMUST00000091506 204 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ddx28Q9CWT6 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 143.5 ms