Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26246-201ENSMUST00000178388 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm25155-201ENSMUST00000178450 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm24760-201ENSMUST00000178530 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm22285-201ENSMUST00000178576 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm22417-201ENSMUST00000178656 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm26270-201ENSMUST00000178690 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm23313-201ENSMUST00000178931 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm23089-201ENSMUST00000178947 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm24153-201ENSMUST00000179280 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm25597-201ENSMUST00000179388 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm25816-201ENSMUST00000179764 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm26188-201ENSMUST00000179963 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm26433-201ENSMUST00000180227 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm22128-201ENSMUST00000180346 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm8676-201ENSMUST00000184206 637 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm27700-201ENSMUST00000185003 81 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm29600-201ENSMUST00000188687 377 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Mir7118-201ENSMUST00000197760 61 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm25199-201ENSMUST00000083095 104 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Mir499-201ENSMUST00000102357 79 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm7327-201ENSMUST00000120925 652 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm14982-201ENSMUST00000121102 442 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm25808-201ENSMUST00000122784 284 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm25153-201ENSMUST00000157118 156 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm22794-201ENSMUST00000157228 306 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm25280-201ENSMUST00000157269 101 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm24780-201ENSMUST00000157635 143 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm25334-201ENSMUST00000158036 110 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm17085-201ENSMUST00000165425 502 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm8392-201ENSMUST00000185647 835 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm45452-201ENSMUST00000210905 177 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.05□□□□□ -1.92
Smc1aQ9CU62 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Mir208a-201ENSMUST00000083498 83 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Snord7-201ENSMUST00000083781 97 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.05□□□□□ -1.92
Smc1aQ9CU62 Gm14815-201ENSMUST00000120060 488 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm23111-201ENSMUST00000122652 105 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm22011-201ENSMUST00000158790 123 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm23704-201ENSMUST00000158844 340 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm25528-201ENSMUST00000180264 132 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm27676-201ENSMUST00000183669 61 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm29640-201ENSMUST00000187972 278 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm15235-201ENSMUST00000200572 194 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm44903-201ENSMUST00000206840 130 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Gm25582-201ENSMUST00000083412 110 ntBASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Smc1aQ9CU62 Mir542-201ENSMUST00000102186 85 ntBASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Gm14007-201ENSMUST00000118288 210 ntBASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Gm26275-201ENSMUST00000157101 268 ntBASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Gm2930-201ENSMUST00000170403 474 ntBASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Snord53-201ENSMUST00000175146 78 ntBASIC3.03□□□□□ -1.92
Smc1aQ9CU62 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Smc1aQ9CU62 Trbv7-201ENSMUST00000193339 402 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms