Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Nkx6-1Q99MA9 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Snord72-201ENSMUST00000104549 81 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm12062-201ENSMUST00000117533 259 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm11456-201ENSMUST00000121070 256 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm10444-201ENSMUST00000126708 148 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm22561-201ENSMUST00000157331 84 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm27723-201ENSMUST00000157398 63 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm23752-201ENSMUST00000157584 115 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm22113-201ENSMUST00000158343 104 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm27699-201ENSMUST00000183553 180 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm27773-201ENSMUST00000184087 78 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm29262-201ENSMUST00000190084 196 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm29704-201ENSMUST00000196011 253 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm4248-201ENSMUST00000196905 316 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm43814-201ENSMUST00000197851 413 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm10088-201ENSMUST00000074116 423 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.17□□□□□ -1.74
Nkx6-1Q99MA9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm15426-201ENSMUST00000117823 556 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm14861-201ENSMUST00000119451 455 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm12238-201ENSMUST00000127764 124 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm24914-201ENSMUST00000157285 313 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm23829-201ENSMUST00000157392 270 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm23782-201ENSMUST00000157939 120 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm23781-201ENSMUST00000157940 308 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm23545-201ENSMUST00000158205 104 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Nron-204ENSMUST00000158971 370 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm17187-201ENSMUST00000164622 410 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm23921-201ENSMUST00000175258 107 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm24264-201ENSMUST00000179835 94 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm34091-201ENSMUST00000200875 604 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm43925-201ENSMUST00000203498 206 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm5876-201ENSMUST00000203735 243 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm44844-201ENSMUST00000207242 336 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.16□□□□□ -1.74
Nkx6-1Q99MA9 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Nkx6-1Q99MA9 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Nkx6-1Q99MA9 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.15□□□□□ -1.74
Nkx6-1Q99MA9 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Nkx6-1Q99MA9 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm24982-201ENSMUST00000104456 132 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Mir294-201ENSMUST00000104710 84 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm13329-201ENSMUST00000117063 265 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm14516-201ENSMUST00000120012 252 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm13692-201ENSMUST00000120774 371 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm25104-201ENSMUST00000122476 163 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm22958-201ENSMUST00000122512 184 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm24630-201ENSMUST00000122768 106 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm26414-201ENSMUST00000157674 269 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm22336-201ENSMUST00000157719 107 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm24664-201ENSMUST00000158939 100 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm23816-201ENSMUST00000179617 132 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm7909-201ENSMUST00000182688 614 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms