Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm31849-201ENSMUST00000220306 375 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm25402-201ENSMUST00000082966 131 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm26128-201ENSMUST00000083170 110 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Lsm1Q8VC85 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.17□□□□□ -2.06
Lsm1Q8VC85 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm25407-201ENSMUST00000104102 134 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm15159-201ENSMUST00000117062 764 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm11490-201ENSMUST00000118128 272 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm13454-201ENSMUST00000118166 483 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm12105-201ENSMUST00000120846 779 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm22037-201ENSMUST00000157280 296 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm23137-201ENSMUST00000157559 107 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm28637-201ENSMUST00000179424 345 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.16□□□□□ -2.06
Lsm1Q8VC85 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.16□□□□□ -2.06
Lsm1Q8VC85 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
Lsm1Q8VC85 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.15□□□□□ -2.06
Lsm1Q8VC85 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Mir344c-201ENSMUST00000103919 92 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm14669-201ENSMUST00000118841 250 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm9043-201ENSMUST00000119677 314 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm25808-201ENSMUST00000122784 284 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm23587-201ENSMUST00000157658 84 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Mir5101-201ENSMUST00000175181 83 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm43804-201ENSMUST00000198280 456 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm42976-201ENSMUST00000200313 222 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm45226-201ENSMUST00000206602 288 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm22353-201ENSMUST00000083918 136 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.15□□□□□ -2.07
Lsm1Q8VC85 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm44286-201ENSMUST00000204098 1487 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm15846-201ENSMUST00000116022 320 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm15844-201ENSMUST00000118016 576 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm22517-201ENSMUST00000158265 136 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm23005-201ENSMUST00000158950 136 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Mir3076-201ENSMUST00000175415 60 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm24969-201ENSMUST00000180331 79 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm27761-201ENSMUST00000184091 131 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm20948-201ENSMUST00000211091 449 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm45530-201ENSMUST00000211658 225 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Lsm1Q8VC85 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm23472-201ENSMUST00000101806 191 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm13239-201ENSMUST00000119920 637 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm9071-201ENSMUST00000165915 474 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm24497-201ENSMUST00000177868 191 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm23933-201ENSMUST00000178405 79 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm25939-201ENSMUST00000179876 191 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Mir6541-201ENSMUST00000183649 110 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Mir6993-201ENSMUST00000184912 65 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm38075-201ENSMUST00000191979 920 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm37353-201ENSMUST00000194497 313 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm45438-201ENSMUST00000210242 564 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm5374-201ENSMUST00000222868 657 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Gm23444-201ENSMUST00000082922 191 ntBASIC2.13□□□□□ -2.07
Lsm1Q8VC85 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms