Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm13650-201ENSMUST00000117729 433 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm23068-201ENSMUST00000158239 293 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm22242-201ENSMUST00000175224 118 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm24811-201ENSMUST00000175313 100 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm20693-201ENSMUST00000177431 211 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm28339-201ENSMUST00000185845 696 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm29062-201ENSMUST00000186032 694 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm28057-201ENSMUST00000186603 615 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm28896-201ENSMUST00000188609 696 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm9722-201ENSMUST00000194568 802 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm38107-201ENSMUST00000194873 696 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm43651-201ENSMUST00000199796 439 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm5358-201ENSMUST00000212814 353 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm24950-201ENSMUST00000082768 191 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm23971-201ENSMUST00000083317 191 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm23849-201ENSMUST00000083833 191 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Gm26316-201ENSMUST00000083886 191 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Ushbp1Q8R370 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm12765-201ENSMUST00000117273 615 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm11598-201ENSMUST00000119257 357 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm14647-201ENSMUST00000119392 680 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm11600-201ENSMUST00000119592 240 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm13409-201ENSMUST00000122072 546 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm25105-201ENSMUST00000122477 130 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm8121-201ENSMUST00000153583 499 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm23667-201ENSMUST00000157466 120 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm25438-201ENSMUST00000158281 110 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Nron-204ENSMUST00000158971 370 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Mir5129-201ENSMUST00000174938 78 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm23191-201ENSMUST00000179147 107 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm27490-201ENSMUST00000184754 128 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Mir6993-201ENSMUST00000184912 65 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm8600-201ENSMUST00000186320 905 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm37617-201ENSMUST00000194309 159 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm6510-201ENSMUST00000195916 574 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm18854-201ENSMUST00000211196 329 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.17□□□□□ -1.74
Ushbp1Q8R370 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm14657-201ENSMUST00000117461 302 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm13085-201ENSMUST00000118356 171 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm13228-201ENSMUST00000118937 634 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm13511-201ENSMUST00000121167 363 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm14638-201ENSMUST00000121338 216 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm23755-201ENSMUST00000157578 343 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm23666-201ENSMUST00000158053 116 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm23852-201ENSMUST00000158376 77 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm17148-201ENSMUST00000164702 249 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm22108-201ENSMUST00000177961 106 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm24798-201ENSMUST00000179334 106 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Mir7578-201ENSMUST00000183455 82 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm21673-201ENSMUST00000186640 436 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm21135-201ENSMUST00000189023 436 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms