Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm13228-201ENSMUST00000118937 634 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm11429-201ENSMUST00000119089 144 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm23016-201ENSMUST00000158431 62 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm24737-201ENSMUST00000158861 100 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm26141-201ENSMUST00000175299 126 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm24518-201ENSMUST00000180275 94 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm27385-201ENSMUST00000184747 104 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm6947-201ENSMUST00000186254 78 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm28163-201ENSMUST00000187099 325 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.09□□□□□ -1.75
Vps53Q8CCB4 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm26121-201ENSMUST00000083364 162 ntBASIC4.09□□□□□ -1.75
Vps53Q8CCB4 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.09□□□□□ -1.76
Vps53Q8CCB4 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm12806-201ENSMUST00000119384 268 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm14008-201ENSMUST00000120483 274 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm14765-201ENSMUST00000121954 326 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm25827-201ENSMUST00000157089 107 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm24784-201ENSMUST00000157640 62 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm24739-201ENSMUST00000158855 292 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm8338-201ENSMUST00000163928 363 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm4479-201ENSMUST00000178807 171 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Mir6993-201ENSMUST00000184912 65 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm33354-201ENSMUST00000195448 906 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm19147-201ENSMUST00000199622 652 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm35876-201ENSMUST00000205044 459 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm36776-201ENSMUST00000207006 203 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm23297-201ENSMUST00000083184 127 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.08□□□□□ -1.76
Vps53Q8CCB4 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm24951-201ENSMUST00000102182 109 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm14973-201ENSMUST00000117248 255 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm4916-201ENSMUST00000126139 642 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm23234-201ENSMUST00000157304 134 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm25860-201ENSMUST00000158252 126 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm24225-201ENSMUST00000158825 98 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm15900-201ENSMUST00000161584 342 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm20543-201ENSMUST00000174200 726 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm24713-201ENSMUST00000178850 107 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm25448-201ENSMUST00000180065 107 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm27249-201ENSMUST00000185049 328 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm38356-201ENSMUST00000194313 408 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm38019-201ENSMUST00000195133 380 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm43217-201ENSMUST00000199513 367 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm7751-201ENSMUST00000212868 709 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm8785-201ENSMUST00000220259 487 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm23096-201ENSMUST00000083447 107 ntBASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Vps53Q8CCB4 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Mir759-201ENSMUST00000103254 98 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm23532-201ENSMUST00000104569 112 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm14647-201ENSMUST00000119392 680 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm8532-201ENSMUST00000179174 461 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm25361-201ENSMUST00000179358 76 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms