Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm22563-201ENSMUST00000157333 269 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm22929-201ENSMUST00000175517 107 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Gm45192-201ENSMUST00000206749 283 ntBASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col6a6Q8C6K9 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm11248-201ENSMUST00000119568 201 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm22897-201ENSMUST00000197860 128 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm20948-201ENSMUST00000211091 449 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm23455-201ENSMUST00000083331 100 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm14163-201ENSMUST00000117342 217 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm12697-201ENSMUST00000118008 667 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm25341-201ENSMUST00000157461 268 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm43070-201ENSMUST00000196938 415 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 AC165146.1-201ENSMUST00000223777 900 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Mir423-201ENSMUST00000083584 109 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Gm25005-201ENSMUST00000083812 156 ntBASIC1.23□□□□□ -2.21
Col6a6Q8C6K9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm22521-201ENSMUST00000158272 134 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm3104-201ENSMUST00000171004 473 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm10074-201ENSMUST00000174543 249 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Mir211-201ENSMUST00000083651 106 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm26154-201ENSMUST00000102339 96 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Mir1192-201ENSMUST00000116976 121 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm11404-201ENSMUST00000120872 494 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm22107-201ENSMUST00000122548 100 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm16331-201ENSMUST00000144274 498 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm9068-201ENSMUST00000217393 455 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Mir10b-201ENSMUST00000083566 68 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm24445-201ENSMUST00000083981 107 ntBASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Col6a6Q8C6K9 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.21□□□□□ -2.22
Col6a6Q8C6K9 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Col6a6Q8C6K9 Gm25787-201ENSMUST00000104709 92 ntBASIC1.21□□□□□ -2.22
Col6a6Q8C6K9 Gm27245-201ENSMUST00000184385 376 ntBASIC1.21□□□□□ -2.22
Col6a6Q8C6K9 Gm9628-201ENSMUST00000222169 725 ntBASIC1.21□□□□□ -2.22
Col6a6Q8C6K9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col6a6Q8C6K9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Col6a6Q8C6K9 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Col6a6Q8C6K9 Mir343-201ENSMUST00000102360 75 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm28951-201ENSMUST00000190742 313 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm32033-201ENSMUST00000193483 339 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm37993-201ENSMUST00000195301 988 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm43510-201ENSMUST00000197922 353 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm7739-201ENSMUST00000221131 1560 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm25506-201ENSMUST00000104339 70 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm15125-201ENSMUST00000116185 800 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm15282-201ENSMUST00000117707 300 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm12587-201ENSMUST00000120180 427 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm17064-201ENSMUST00000167690 452 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm8532-201ENSMUST00000179174 461 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm27025-201ENSMUST00000182392 942 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm43115-201ENSMUST00000196244 160 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.2□□□□□ -2.22
Col6a6Q8C6K9 Gm6913-201ENSMUST00000100019 348 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm2066-201ENSMUST00000118046 389 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm2288-201ENSMUST00000118560 638 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm2318-201ENSMUST00000119623 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm13153-201ENSMUST00000120969 637 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm7438-201ENSMUST00000177664 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm7408-201ENSMUST00000178014 639 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms