Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm29005-201ENSMUST00000186773 320 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm8599-201ENSMUST00000193033 457 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 AC138401.1-201ENSMUST00000221533 116 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Mir346-201ENSMUST00000083547 98 ntBASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim47Q8C0E3 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm12191-201ENSMUST00000118307 348 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm9703-201ENSMUST00000119573 343 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm15926-201ENSMUST00000120492 550 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm5391-201ENSMUST00000121155 613 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm23982-201ENSMUST00000157141 106 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm25115-201ENSMUST00000157187 140 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm15796-201ENSMUST00000162135 204 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm22243-201ENSMUST00000178754 120 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm37167-201ENSMUST00000194946 396 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Mir721-201ENSMUST00000200230 88 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 AC108416.2-201ENSMUST00000226792 367 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm22061-201ENSMUST00000082557 107 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm22062-201ENSMUST00000082563 107 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm10343-201ENSMUST00000096279 348 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim47Q8C0E3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC5.09□□□□□ -1.59
Trim47Q8C0E3 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.09□□□□□ -1.6
Trim47Q8C0E3 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.09□□□□□ -1.6
Trim47Q8C0E3 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Trim47Q8C0E3 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Mir690-201ENSMUST00000102110 109 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm13504-201ENSMUST00000117490 316 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm12884-201ENSMUST00000120371 325 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm14008-201ENSMUST00000120483 274 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm14875-201ENSMUST00000120881 319 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm14500-201ENSMUST00000121647 113 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm25621-201ENSMUST00000157223 114 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm22447-201ENSMUST00000158155 92 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm44324-201ENSMUST00000198517 135 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm19243-201ENSMUST00000198592 269 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm45907-201ENSMUST00000213023 193 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 AC154213.2-201ENSMUST00000227138 187 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Mecom-201ENSMUST00000061088 348 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm25134-201ENSMUST00000082646 160 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 AC126673.3-201ENSMUST00000223414 3829 ntBASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim47Q8C0E3 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Mir592-201ENSMUST00000102113 96 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm23193-201ENSMUST00000102427 82 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm23319-201ENSMUST00000104467 131 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm14880-201ENSMUST00000117581 292 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm25985-201ENSMUST00000122677 107 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm22213-201ENSMUST00000157564 119 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm22699-201ENSMUST00000175376 105 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms