Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm28623-201ENSMUST00000187219 192 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm9696-202ENSMUST00000191541 830 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm34073-201ENSMUST00000195736 212 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm42570-201ENSMUST00000195937 292 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm44583-201ENSMUST00000207478 281 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm25200-201ENSMUST00000083094 130 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm22169-201ENSMUST00000083229 107 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim56Q80VI1 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.75□□□□□ -1.65
Trim56Q80VI1 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim56Q80VI1 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim56Q80VI1 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm15783-201ENSMUST00000117521 633 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm26148-201ENSMUST00000157430 68 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm26320-201ENSMUST00000157742 306 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm22328-201ENSMUST00000158074 112 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm23198-201ENSMUST00000158811 91 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm2862-201ENSMUST00000161524 328 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm22114-201ENSMUST00000177756 107 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm18384-201ENSMUST00000195974 808 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Mir129b-201ENSMUST00000197461 65 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm2059-201ENSMUST00000212025 287 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim56Q80VI1 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.74□□□□□ -1.65
Trim56Q80VI1 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim56Q80VI1 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.74□□□□□ -1.65
Trim56Q80VI1 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim56Q80VI1 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim56Q80VI1 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm23142-201ENSMUST00000101848 105 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm26240-201ENSMUST00000101893 105 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm22496-201ENSMUST00000104493 88 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm14656-201ENSMUST00000120342 502 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm13557-201ENSMUST00000120771 382 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm12956-201ENSMUST00000122184 414 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Mir5129-201ENSMUST00000174938 78 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm25175-201ENSMUST00000178712 79 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm23816-201ENSMUST00000179617 132 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm28744-201ENSMUST00000189939 340 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm29330-201ENSMUST00000190032 699 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm19774-201ENSMUST00000190667 114 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm44099-201ENSMUST00000203299 112 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm17829-201ENSMUST00000219782 344 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Gm26066-201ENSMUST00000083385 109 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim56Q80VI1 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim56Q80VI1 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Trim56Q80VI1 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.73□□□□□ -1.65
Trim56Q80VI1 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm6274-201ENSMUST00000118173 797 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm12379-201ENSMUST00000119607 391 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24596-201ENSMUST00000122504 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24914-201ENSMUST00000157285 313 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23137-201ENSMUST00000157559 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25454-201ENSMUST00000157947 315 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24584-201ENSMUST00000157972 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25211-201ENSMUST00000177553 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24540-201ENSMUST00000177627 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25256-201ENSMUST00000177746 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22822-201ENSMUST00000177941 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Rnu6-201ENSMUST00000178023 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23151-201ENSMUST00000178061 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23402-201ENSMUST00000178130 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25245-201ENSMUST00000178139 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24753-201ENSMUST00000178183 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25829-201ENSMUST00000178275 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22092-201ENSMUST00000178290 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24486-201ENSMUST00000178420 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23217-201ENSMUST00000178482 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26245-201ENSMUST00000178491 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24019-201ENSMUST00000178620 107 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms