Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Snrnp40Q6PE01 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Snrnp40Q6PE01 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.9□□□□□ -1.94
Snrnp40Q6PE01 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Snrnp40Q6PE01 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.9□□□□□ -1.94
Snrnp40Q6PE01 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm3940-201ENSMUST00000105087 432 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm25507-201ENSMUST00000116981 144 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm5937-201ENSMUST00000119715 643 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm14810-201ENSMUST00000121628 486 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm23716-201ENSMUST00000157348 144 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm24787-201ENSMUST00000157380 123 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm16101-201ENSMUST00000160695 430 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm10075-201ENSMUST00000162030 545 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Mir7050-201ENSMUST00000184636 60 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm27919-201ENSMUST00000185163 107 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm44887-201ENSMUST00000208980 178 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm22979-201ENSMUST00000082609 159 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm25411-201ENSMUST00000083760 151 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm25876-201ENSMUST00000104329 119 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm11356-201ENSMUST00000118974 192 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm15760-201ENSMUST00000119553 283 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm15223-201ENSMUST00000120989 826 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22026-201ENSMUST00000122735 281 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm26275-201ENSMUST00000157101 268 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23671-201ENSMUST00000157472 103 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23078-201ENSMUST00000157848 148 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22532-201ENSMUST00000158822 140 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Mir3965-201ENSMUST00000175570 69 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22290-201ENSMUST00000177655 107 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22583-201ENSMUST00000178031 107 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm24306-201ENSMUST00000180229 79 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Mir8106-201ENSMUST00000184520 139 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Zfp-ps-201ENSMUST00000185025 478 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm28755-201ENSMUST00000185773 199 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm8600-201ENSMUST00000186320 905 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm5116-201ENSMUST00000187732 463 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm29627-201ENSMUST00000187984 463 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm29184-201ENSMUST00000190038 334 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm18296-201ENSMUST00000192475 783 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm44609-201ENSMUST00000207157 460 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm18113-201ENSMUST00000220630 303 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22810-201ENSMUST00000082741 158 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm24950-201ENSMUST00000082768 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23971-201ENSMUST00000083317 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Mir137-201ENSMUST00000083635 73 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23848-201ENSMUST00000083826 106 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23849-201ENSMUST00000083833 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm26316-201ENSMUST00000083886 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Rnu2-10-201ENSMUST00000084010 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms