Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Snrnp40Q6PE01 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Snrnp40Q6PE01 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.9□□□□□ -1.94
Snrnp40Q6PE01 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Snrnp40Q6PE01 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.9□□□□□ -1.94
Snrnp40Q6PE01 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm3940-201ENSMUST00000105087 432 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm25507-201ENSMUST00000116981 144 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm5937-201ENSMUST00000119715 643 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm14810-201ENSMUST00000121628 486 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm23716-201ENSMUST00000157348 144 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm24787-201ENSMUST00000157380 123 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm16101-201ENSMUST00000160695 430 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm10075-201ENSMUST00000162030 545 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Mir7050-201ENSMUST00000184636 60 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm27919-201ENSMUST00000185163 107 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm44887-201ENSMUST00000208980 178 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm22979-201ENSMUST00000082609 159 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Gm25411-201ENSMUST00000083760 151 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Snrnp40Q6PE01 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm25876-201ENSMUST00000104329 119 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm11356-201ENSMUST00000118974 192 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm15760-201ENSMUST00000119553 283 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm15223-201ENSMUST00000120989 826 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22026-201ENSMUST00000122735 281 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm26275-201ENSMUST00000157101 268 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23671-201ENSMUST00000157472 103 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23078-201ENSMUST00000157848 148 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22532-201ENSMUST00000158822 140 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Mir3965-201ENSMUST00000175570 69 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22290-201ENSMUST00000177655 107 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22583-201ENSMUST00000178031 107 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm24306-201ENSMUST00000180229 79 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Mir8106-201ENSMUST00000184520 139 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Zfp-ps-201ENSMUST00000185025 478 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm28755-201ENSMUST00000185773 199 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm8600-201ENSMUST00000186320 905 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm5116-201ENSMUST00000187732 463 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm29627-201ENSMUST00000187984 463 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm29184-201ENSMUST00000190038 334 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm18296-201ENSMUST00000192475 783 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm44609-201ENSMUST00000207157 460 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm18113-201ENSMUST00000220630 303 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm22810-201ENSMUST00000082741 158 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm24950-201ENSMUST00000082768 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23971-201ENSMUST00000083317 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Mir137-201ENSMUST00000083635 73 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23848-201ENSMUST00000083826 106 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm23849-201ENSMUST00000083833 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Gm26316-201ENSMUST00000083886 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Rnu2-10-201ENSMUST00000084010 191 ntBASIC2.89□□□□□ -1.95
Snrnp40Q6PE01 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms