Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim28Q62318 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm12149-201ENSMUST00000117511 654 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm12053-201ENSMUST00000119022 252 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm15106-201ENSMUST00000119691 821 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm37104-201ENSMUST00000193278 196 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm37085-201ENSMUST00000193780 196 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm43214-201ENSMUST00000199242 352 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Snord42a-201ENSMUST00000082606 65 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm22508-201ENSMUST00000082772 110 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.45□□□□□ -1.7
Trim28Q62318 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim28Q62318 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trim28Q62318 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim28Q62318 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim28Q62318 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim28Q62318 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim28Q62318 Gm14142-201ENSMUST00000117833 296 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm14541-201ENSMUST00000118985 157 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm12787-201ENSMUST00000119234 396 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm14647-201ENSMUST00000119392 680 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm12739-201ENSMUST00000119769 382 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm24504-201ENSMUST00000157679 100 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm17062-201ENSMUST00000166987 461 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm22348-201ENSMUST00000178674 79 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm28118-201ENSMUST00000185957 294 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm29038-201ENSMUST00000191543 678 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim28Q62318 Gm3010-201ENSMUST00000198805 448 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm45150-201ENSMUST00000206051 467 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim28Q62318 Gm8249-201ENSMUST00000219225 465 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim28Q62318 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim28Q62318 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.44□□□□□ -1.7
Trim28Q62318 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim28Q62318 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim28Q62318 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim28Q62318 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim28Q62318 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim28Q62318 Gm12125-201ENSMUST00000117261 736 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm9043-201ENSMUST00000119677 314 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm15190-201ENSMUST00000120855 276 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm7925-201ENSMUST00000166690 401 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Trim28Q62318 Gm25939-201ENSMUST00000179876 191 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm26180-201ENSMUST00000179942 107 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm27733-201ENSMUST00000184803 68 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim28Q62318 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm24622-201ENSMUST00000082619 162 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Gm25929-201ENSMUST00000082784 107 ntBASIC4.43□□□□□ -1.7
Trim28Q62318 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Trim28Q62318 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim28Q62318 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim28Q62318 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim28Q62318 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim28Q62318 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
Trim28Q62318 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Trim28Q62318 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim28Q62318 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Trim28Q62318 Gm24119-201ENSMUST00000103979 246 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Gm11577-201ENSMUST00000118030 737 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim28Q62318 Gm24914-201ENSMUST00000157285 313 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Gm25339-201ENSMUST00000157458 232 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Gm23581-201ENSMUST00000158531 63 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Gm28666-201ENSMUST00000186649 274 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim28Q62318 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Gm29754-201ENSMUST00000206269 358 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim28Q62318 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim28Q62318 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.42□□□□□ -1.7
Trim28Q62318 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms