Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm16111-201ENSMUST00000162128 285 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Mir7017-201ENSMUST00000184894 62 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm7329-201ENSMUST00000185915 210 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm28412-201ENSMUST00000187243 177 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm44476-201ENSMUST00000196225 91 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm19649-201ENSMUST00000201126 822 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm5317-201ENSMUST00000204445 847 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm44212-201ENSMUST00000205016 897 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm18453-201ENSMUST00000208000 626 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm45687-201ENSMUST00000209454 155 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10088-201ENSMUST00000074116 423 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav8d-2Q5R1B6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm14751-201ENSMUST00000117693 222 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm2318-201ENSMUST00000119623 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm2768-201ENSMUST00000121062 250 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm11414-201ENSMUST00000121795 263 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24212-201ENSMUST00000158258 132 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Mir5129-201ENSMUST00000174938 78 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm7438-201ENSMUST00000177664 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm7408-201ENSMUST00000178014 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm7386-201ENSMUST00000178020 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm3657-201ENSMUST00000178170 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm7415-201ENSMUST00000178205 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm7398-201ENSMUST00000178589 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm7391-201ENSMUST00000178680 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm7375-201ENSMUST00000179232 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm3681-201ENSMUST00000179940 639 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Mir6541-201ENSMUST00000183649 110 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm27869-201ENSMUST00000184327 122 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm27163-201ENSMUST00000184767 409 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm17929-201ENSMUST00000186851 627 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm37987-201ENSMUST00000194999 825 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm43512-201ENSMUST00000198495 176 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm46389-201ENSMUST00000223199 392 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.39□□□□□ -2.03
Trav8d-2Q5R1B6 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm11219-201ENSMUST00000118565 358 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm16412-201ENSMUST00000121602 273 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm12238-201ENSMUST00000127764 124 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm25557-201ENSMUST00000158084 315 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10177-202ENSMUST00000161698 207 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm20698-201ENSMUST00000175657 233 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm9696-202ENSMUST00000191541 830 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm2544-201ENSMUST00000222702 756 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Trav8d-2Q5R1B6 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23950-201ENSMUST00000104026 129 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 127.6 ms