Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm23190-201ENSMUST00000180307 64 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm2719-201ENSMUST00000191929 444 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm43600-201ENSMUST00000202134 223 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm24661-201ENSMUST00000083205 104 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm25008-201ENSMUST00000083809 81 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.4□□□□□ -2.03
Upf3bQ3ULL6 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm13085-201ENSMUST00000118356 171 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm3788-201ENSMUST00000119949 136 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm5287-201ENSMUST00000120666 598 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm24769-201ENSMUST00000158506 129 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm17072-201ENSMUST00000166673 658 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Mir5099-201ENSMUST00000175257 74 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Mir6371-201ENSMUST00000184470 111 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm8392-201ENSMUST00000185647 835 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm37533-201ENSMUST00000193848 545 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm44555-201ENSMUST00000209008 148 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Upf3bQ3ULL6 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm2348-201ENSMUST00000108782 300 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm15159-201ENSMUST00000117062 764 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm14358-201ENSMUST00000118458 403 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm13627-201ENSMUST00000119700 706 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Mir5129-201ENSMUST00000174938 78 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm20698-201ENSMUST00000175657 233 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm37692-201ENSMUST00000192633 232 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm37989-201ENSMUST00000195202 803 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Mir7232-201ENSMUST00000197929 74 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Upf3bQ3ULL6 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm16053-201ENSMUST00000120511 188 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm11556-201ENSMUST00000120751 288 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm23704-201ENSMUST00000158844 340 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm16326-201ENSMUST00000162843 414 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm17063-201ENSMUST00000168135 456 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Mir6917-201ENSMUST00000184111 61 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm18667-201ENSMUST00000186523 484 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm37213-201ENSMUST00000193077 586 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm43493-201ENSMUST00000199837 202 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Mir497-201ENSMUST00000200557 84 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm44083-201ENSMUST00000203114 337 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm44137-201ENSMUST00000203670 367 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm23249-201ENSMUST00000083369 161 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.37□□□□□ -2.03
Upf3bQ3ULL6 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm24126-201ENSMUST00000104111 106 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm24900-201ENSMUST00000158128 134 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm27399-201ENSMUST00000184250 78 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms