Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm18520-201ENSMUST00000174783 658 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm25670-201ENSMUST00000178423 107 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm26239-201ENSMUST00000178842 107 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm24713-201ENSMUST00000178850 107 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm24267-201ENSMUST00000179841 107 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm25448-201ENSMUST00000180065 107 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm24306-201ENSMUST00000180229 79 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm5116-201ENSMUST00000187732 463 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm29627-201ENSMUST00000187984 463 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.94□□□□□ -1.94
Gabpb1Q00420 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Gabpb1Q00420 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm45387-201ENSMUST00000209792 632 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm18414-201ENSMUST00000210858 694 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm17890-201ENSMUST00000221419 757 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Gabpb1Q00420 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm22810-201ENSMUST00000082741 158 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm24292-201ENSMUST00000082888 107 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm23848-201ENSMUST00000083826 106 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Gm5670-201ENSMUST00000093546 372 ntBASIC2.94□□□□□ -1.94
Gabpb1Q00420 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Gabpb1Q00420 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Gabpb1Q00420 Snord14c-201ENSMUST00000101927 86 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm14918-201ENSMUST00000118153 268 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm14793-201ENSMUST00000118739 311 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm13541-201ENSMUST00000119519 283 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm12412-201ENSMUST00000121867 328 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm12368-201ENSMUST00000122251 434 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm11358-201ENSMUST00000122310 373 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm26277-201ENSMUST00000157097 152 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm23078-201ENSMUST00000157848 148 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm25490-201ENSMUST00000158734 130 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm24925-201ENSMUST00000178157 107 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm19089-201ENSMUST00000197207 613 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm44520-201ENSMUST00000205447 802 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.93□□□□□ -1.94
Gabpb1Q00420 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Gm3442-201ENSMUST00000216808 710 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.93□□□□□ -1.94
Gabpb1Q00420 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Gabpb1Q00420 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Gabpb1Q00420 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm25876-201ENSMUST00000104329 119 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm3940-201ENSMUST00000105087 432 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm15399-201ENSMUST00000118055 724 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm15760-201ENSMUST00000119553 283 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm11785-201ENSMUST00000120165 601 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm13210-201ENSMUST00000121483 273 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm15065-201ENSMUST00000121699 273 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm13424-201ENSMUST00000122301 354 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm23206-201ENSMUST00000122720 184 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm13901-201ENSMUST00000137252 468 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm24787-201ENSMUST00000157380 123 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm24959-201ENSMUST00000157924 146 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Mir8106-201ENSMUST00000184520 139 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm27249-201ENSMUST00000185049 328 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm37281-201ENSMUST00000192412 439 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm37757-201ENSMUST00000193072 210 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm37007-201ENSMUST00000194234 319 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm42475-201ENSMUST00000201212 295 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm45105-201ENSMUST00000207824 397 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm6012-201ENSMUST00000210821 730 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.92□□□□□ -1.94
Gabpb1Q00420 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Gabpb1Q00420 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Gabpb1Q00420 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.91□□□□□ -1.94
Gabpb1Q00420 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms