Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm43070-201ENSMUST00000196938 415 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.21□□□□□ -2.05
Cux1P53564 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Cux1P53564 Gm13355-201ENSMUST00000117996 317 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Gm13409-201ENSMUST00000122072 546 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Gm23167-201ENSMUST00000157155 103 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Mir7052-201ENSMUST00000184821 65 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.21□□□□□ -2.06
Cux1P53564 Gm19457-201ENSMUST00000200995 448 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Gm43224-201ENSMUST00000201567 898 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Cux1P53564 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cux1P53564 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.21□□□□□ -2.06
Cux1P53564 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.21□□□□□ -2.06
Cux1P53564 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cux1P53564 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Cux1P53564 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Cux1P53564 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cux1P53564 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
Cux1P53564 Gm11356-201ENSMUST00000118974 192 ntBASIC2.2□□□□□ -2.06
Cux1P53564 Gm23633-201ENSMUST00000175293 119 ntBASIC2.2□□□□□ -2.06
Cux1P53564 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.2□□□□□ -2.06
Cux1P53564 Gm27698-201ENSMUST00000184060 249 ntBASIC2.2□□□□□ -2.06
Cux1P53564 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.2□□□□□ -2.06
Cux1P53564 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Cux1P53564 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.19□□□□□ -2.06
Cux1P53564 Gm18892-201ENSMUST00000217628 881 ntBASIC2.19□□□□□ -2.06
Cux1P53564 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.19□□□□□ -2.06
Cux1P53564 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.19□□□□□ -2.06
Cux1P53564 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.19□□□□□ -2.06
Cux1P53564 Gm23347-201ENSMUST00000083823 82 ntBASIC2.19□□□□□ -2.06
Cux1P53564 Gm22866-201ENSMUST00000083947 177 ntBASIC2.19□□□□□ -2.06
Cux1P53564 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Cux1P53564 Gm14923-201ENSMUST00000118270 155 ntBASIC2.18□□□□□ -2.06
Cux1P53564 Gm14008-201ENSMUST00000120483 274 ntBASIC2.18□□□□□ -2.06
Cux1P53564 Gm5958-201ENSMUST00000147698 297 ntBASIC2.18□□□□□ -2.06
Cux1P53564 Gm23760-201ENSMUST00000158350 116 ntBASIC2.18□□□□□ -2.06
Cux1P53564 Gm25365-201ENSMUST00000158852 121 ntBASIC2.18□□□□□ -2.06
Cux1P53564 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Cux1P53564 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Cux1P53564 Gm15235-201ENSMUST00000200572 194 ntBASIC2.18□□□□□ -2.06
Cux1P53564 Gm42960-201ENSMUST00000202160 241 ntBASIC2.18□□□□□ -2.06
Cux1P53564 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.18□□□□□ -2.06
Cux1P53564 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Cux1P53564 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.18□□□□□ -2.06
Cux1P53564 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Cux1P53564 Gm14786-201ENSMUST00000117127 944 ntBASIC2.17□□□□□ -2.06
Cux1P53564 Gm38281-201ENSMUST00000192301 315 ntBASIC2.17□□□□□ -2.06
Cux1P53564 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.17□□□□□ -2.06
Cux1P53564 Mir6962-201ENSMUST00000199512 63 ntBASIC2.17□□□□□ -2.06
Cux1P53564 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.17□□□□□ -2.06
Cux1P53564 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Cux1P53564 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Cux1P53564 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.17□□□□□ -2.06
Cux1P53564 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.17□□□□□ -2.06
Cux1P53564 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Cux1P53564 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Cux1P53564 Gm15282-201ENSMUST00000117707 300 ntBASIC2.17□□□□□ -2.06
Cux1P53564 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.17□□□□□ -2.06
Cux1P53564 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.17□□□□□ -2.06
Cux1P53564 Gm16363-201ENSMUST00000132460 877 ntBASIC2.17□□□□□ -2.06
Cux1P53564 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Cux1P53564 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.17□□□□□ -2.06
Cux1P53564 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.17□□□□□ -2.06
Cux1P53564 Gm44348-201ENSMUST00000200165 122 ntBASIC2.17□□□□□ -2.06
Cux1P53564 Gm43991-201ENSMUST00000203751 274 ntBASIC2.17□□□□□ -2.06
Cux1P53564 Gm7751-201ENSMUST00000212868 709 ntBASIC2.17□□□□□ -2.06
Cux1P53564 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
Cux1P53564 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Cux1P53564 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Cux1P53564 Mir1192-201ENSMUST00000116976 121 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Gm14815-201ENSMUST00000120060 488 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Gm12706-201ENSMUST00000121588 698 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Gm22794-201ENSMUST00000157228 306 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Cux1P53564 Mir6995-201ENSMUST00000183658 71 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Gm8151-201ENSMUST00000184817 871 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Gm21147-201ENSMUST00000186046 913 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Gm19089-201ENSMUST00000197207 613 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Mir448-201ENSMUST00000083516 112 ntBASIC2.16□□□□□ -2.06
Cux1P53564 Gm12587-201ENSMUST00000120180 427 ntBASIC2.15□□□□□ -2.07
Cux1P53564 Gm2005-201ENSMUST00000120759 542 ntBASIC2.15□□□□□ -2.07
Cux1P53564 Gm11819-201ENSMUST00000122192 372 ntBASIC2.15□□□□□ -2.07
Cux1P53564 Gm23886-201ENSMUST00000122684 313 ntBASIC2.15□□□□□ -2.07
Cux1P53564 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Cux1P53564 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Cux1P53564 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.15□□□□□ -2.07
Cux1P53564 Gm23636-201ENSMUST00000175070 95 ntBASIC2.15□□□□□ -2.07
Cux1P53564 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.15□□□□□ -2.07
Cux1P53564 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.15□□□□□ -2.07
Cux1P53564 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Cux1P53564 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.15□□□□□ -2.07
Cux1P53564 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.15□□□□□ -2.07
Cux1P53564 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms