Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm26041-201ENSMUST00000158148 108 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc1P18828 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm23933-201ENSMUST00000178405 79 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm27374-201ENSMUST00000183660 81 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm28169-201ENSMUST00000190342 345 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm17966-201ENSMUST00000193453 594 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.16□□□□□ -2.06
Sdc1P18828 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm45080-201ENSMUST00000206648 283 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm44961-201ENSMUST00000207450 196 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm46146-201ENSMUST00000217483 346 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm22974-201ENSMUST00000083301 103 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Mir423-201ENSMUST00000083584 109 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Mir101b-201ENSMUST00000083622 97 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc1P18828 Gm23516-201ENSMUST00000093728 107 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.16□□□□□ -2.06
Sdc1P18828 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Sdc1P18828 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.16□□□□□ -2.06
Sdc1P18828 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Sdc1P18828 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
Sdc1P18828 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc1P18828 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Sdc1P18828 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Sdc1P18828 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Sdc1P18828 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm14629-201ENSMUST00000122428 144 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Sdc1P18828 Gm2830-201ENSMUST00000140330 385 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm24745-201ENSMUST00000157840 85 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm24998-201ENSMUST00000157908 89 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
Sdc1P18828 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Sdc1P18828 Gm29104-201ENSMUST00000186304 222 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.15□□□□□ -2.07
Sdc1P18828 Gm20058-201ENSMUST00000186939 284 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.15□□□□□ -2.07
Sdc1P18828 Gm37495-201ENSMUST00000194590 264 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm43722-201ENSMUST00000196054 124 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm44395-201ENSMUST00000197056 153 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm43626-201ENSMUST00000198575 162 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm6615-201ENSMUST00000199426 631 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Sdc1P18828 Gm45445-201ENSMUST00000209586 232 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm34779-201ENSMUST00000210036 263 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm3442-201ENSMUST00000216808 710 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC2.15□□□□□ -2.07
Sdc1P18828 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Sdc1P18828 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Sdc1P18828 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Sdc1P18828 Gm23645-201ENSMUST00000083228 108 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Gm10161-201ENSMUST00000091506 204 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Olfr895-201ENSMUST00000093864 951 ntBASIC2.15□□□□□ -2.07
Sdc1P18828 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Sdc1P18828 Gm24376-201ENSMUST00000104399 127 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm11460-201ENSMUST00000118200 361 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm12044-201ENSMUST00000120335 213 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm25294-201ENSMUST00000122791 104 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm25295-201ENSMUST00000122794 306 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Sdc1P18828 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.14□□□□□ -2.07
Sdc1P18828 Gm16129-201ENSMUST00000152628 486 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm26105-201ENSMUST00000157253 190 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm24911-201ENSMUST00000157292 136 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm25220-201ENSMUST00000157546 95 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm26411-201ENSMUST00000157668 107 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm22611-201ENSMUST00000158288 150 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm22947-201ENSMUST00000158559 91 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm18520-201ENSMUST00000174783 658 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.14□□□□□ -2.07
Sdc1P18828 Gm24137-201ENSMUST00000180055 79 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Sdc1P18828 Gm22391-201ENSMUST00000180356 79 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm27220-201ENSMUST00000183453 262 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Mir6382-201ENSMUST00000184055 110 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Mir7028-201ENSMUST00000185016 64 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.14□□□□□ -2.07
Sdc1P18828 Scgb2b6-201ENSMUST00000188132 330 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm36966-201ENSMUST00000192217 413 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm43402-201ENSMUST00000197159 159 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm45387-201ENSMUST00000209792 632 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm9973-202ENSMUST00000220926 166 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms