Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Cacna1bO55017 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm22665-201ENSMUST00000158720 275 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm16147-201ENSMUST00000162143 373 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm20648-201ENSMUST00000175815 328 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm27233-201ENSMUST00000184030 307 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm44266-201ENSMUST00000205235 500 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm45048-201ENSMUST00000207058 429 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm45189-201ENSMUST00000208567 363 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm45247-201ENSMUST00000210757 309 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm24381-201ENSMUST00000122697 104 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm27493-201ENSMUST00000184128 78 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm44358-201ENSMUST00000196301 98 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm43489-201ENSMUST00000196810 993 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm24611-201ENSMUST00000083272 107 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm22740-201ENSMUST00000083439 109 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Mir221-201ENSMUST00000083488 95 ntBASIC1.5□□□□□ -2.17
Cacna1bO55017 Gm22389-201ENSMUST00000158193 301 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.49□□□□□ -2.17
Cacna1bO55017 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Mir10b-201ENSMUST00000083566 68 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cacna1bO55017 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Cacna1bO55017 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm11248-201ENSMUST00000119568 201 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm22036-201ENSMUST00000157279 215 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm23221-201ENSMUST00000158118 93 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Mir1264-201ENSMUST00000175381 86 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm37428-201ENSMUST00000193886 137 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm43193-201ENSMUST00000197732 441 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm31532-201ENSMUST00000203555 767 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm5322-201ENSMUST00000206142 699 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm45687-201ENSMUST00000209454 155 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm19885-201ENSMUST00000212853 343 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm25739-201ENSMUST00000082886 107 ntBASIC1.49□□□□□ -2.17
Cacna1bO55017 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Cacna1bO55017 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm15001-201ENSMUST00000117657 795 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm12587-201ENSMUST00000120180 427 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm22107-201ENSMUST00000122548 100 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm26049-201ENSMUST00000157313 108 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm27477-201ENSMUST00000184649 143 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm43431-201ENSMUST00000198577 340 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC1.48□□□□□ -2.17
Cacna1bO55017 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Cacna1bO55017 AC132384.9-201ENSMUST00000218085 277 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 AC135019.1-201ENSMUST00000219949 307 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Cacna1bO55017 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cacna1bO55017 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Cacna1bO55017 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm16458-201ENSMUST00000121428 502 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm25365-201ENSMUST00000158852 121 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm23636-201ENSMUST00000175070 95 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm27155-201ENSMUST00000183716 898 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm27979-201ENSMUST00000185126 56 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm37418-201ENSMUST00000195031 274 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.48□□□□□ -2.17
Cacna1bO55017 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Cacna1bO55017 Gm25728-201ENSMUST00000104525 159 ntBASIC1.47□□□□□ -2.17
Cacna1bO55017 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC1.47□□□□□ -2.17
Cacna1bO55017 Gm15896-201ENSMUST00000118045 440 ntBASIC1.47□□□□□ -2.17
Cacna1bO55017 Gm23328-201ENSMUST00000157418 132 ntBASIC1.47□□□□□ -2.17
Cacna1bO55017 Gm24467-201ENSMUST00000157887 126 ntBASIC1.47□□□□□ -2.17
Cacna1bO55017 Gm25332-201ENSMUST00000158038 105 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms