Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm24889-201ENSMUST00000104388 132 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm13085-201ENSMUST00000118356 171 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm12878-201ENSMUST00000118744 332 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm13541-201ENSMUST00000119519 283 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm14392-201ENSMUST00000120332 401 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm15167-201ENSMUST00000121997 187 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm14413-201ENSMUST00000122158 408 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm13424-201ENSMUST00000122301 354 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm22038-201ENSMUST00000157277 242 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm23326-201ENSMUST00000157419 105 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm23583-201ENSMUST00000158533 289 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm27245-201ENSMUST00000184385 376 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm19193-201ENSMUST00000190263 590 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm9722-201ENSMUST00000194568 802 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm18551-201ENSMUST00000195594 642 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm42622-201ENSMUST00000197229 355 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm35931-201ENSMUST00000203931 448 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm44084-201ENSMUST00000203947 409 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm18015-201ENSMUST00000214879 316 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm18774-201ENSMUST00000218269 601 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Gm22507-201ENSMUST00000082773 160 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC2.84□□□□□ -1.95
Trav13d-3J3QMG8 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
Trav13d-3J3QMG8 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Trav13d-3J3QMG8 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Trav13d-3J3QMG8 Gm18432-201ENSMUST00000195568 1451 ntBASIC2.84□□□□□ -1.96
Trav13d-3J3QMG8 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Trav13d-3J3QMG8 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm26147-201ENSMUST00000104479 114 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm12458-201ENSMUST00000119387 495 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm14638-201ENSMUST00000121338 216 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm25292-201ENSMUST00000122797 322 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm22098-201ENSMUST00000157930 85 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm25977-201ENSMUST00000158697 85 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm8532-201ENSMUST00000179174 461 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm27490-201ENSMUST00000184754 128 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm29429-201ENSMUST00000187071 121 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm45420-201ENSMUST00000211243 425 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm26446-201ENSMUST00000082455 103 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Snora70-201ENSMUST00000083047 137 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm24045-201ENSMUST00000083113 98 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.83□□□□□ -1.96
Trav13d-3J3QMG8 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm22834-201ENSMUST00000102021 79 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm12805-201ENSMUST00000117305 1048 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm12782-201ENSMUST00000117519 727 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm13510-201ENSMUST00000118659 429 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm6762-201ENSMUST00000121769 289 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm26020-201ENSMUST00000122729 183 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm28399-201ENSMUST00000186221 318 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm28572-201ENSMUST00000187444 318 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm42647-201ENSMUST00000195939 459 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Gm19177-201ENSMUST00000204520 613 ntBASIC2.82□□□□□ -1.96
Trav13d-3J3QMG8 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms