Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Flg-201ENSMUST00000050758 1488 ntBASIC17.47■□□□□ 0.39
Speer3W4VSP1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Speer3W4VSP1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Tgds-204ENSMUST00000228543 1594 ntBASIC17.46■□□□□ 0.39
Speer3W4VSP1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Speer3W4VSP1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.45■□□□□ 0.38
Speer3W4VSP1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Speer3W4VSP1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.45■□□□□ 0.38
Speer3W4VSP1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Speer3W4VSP1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Gm2559-201ENSMUST00000201323 363 ntBASIC17.44■□□□□ 0.38
Speer3W4VSP1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.44■□□□□ 0.38
Speer3W4VSP1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Speer3W4VSP1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.43■□□□□ 0.38
Speer3W4VSP1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Speer3W4VSP1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.42■□□□□ 0.38
Speer3W4VSP1 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.42■□□□□ 0.38
Speer3W4VSP1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Gm4968-201ENSMUST00000071458 858 ntBASIC17.42■□□□□ 0.38
Speer3W4VSP1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Speer3W4VSP1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms