Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb1S4R1E0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.56■□□□□ 0.08
H2afb1S4R1E0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
H2afb1S4R1E0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Mir8112-201ENSMUST00000184382 131 ntBASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Gm2559-201ENSMUST00000201323 363 ntBASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb1S4R1E0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Mir2861-201ENSMUST00000175539 82 ntBASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb1S4R1E0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms