Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm10175-202ENSMUST00000208752 441 ntBASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl40Q9Z2Q5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl40Q9Z2Q5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm11539-201ENSMUST00000119837 557 ntBASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm13436-201ENSMUST00000120418 567 ntBASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Odf3b-204ENSMUST00000227834 930 ntBASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl40Q9Z2Q5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mrpl40Q9Z2Q5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Mrpl40Q9Z2Q5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.14■□□□□ 0.33
Mrpl40Q9Z2Q5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm3375-201ENSMUST00000203929 796 ntBASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl40Q9Z2Q5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm13559-201ENSMUST00000120476 863 ntBASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms