Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h3Q9Z0Y9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm11355-201ENSMUST00000121120 306 ntBASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm27704-201ENSMUST00000185094 107 ntBASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h3Q9Z0Y9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h3Q9Z0Y9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.58■□□□□ 0.57
Nr1h3Q9Z0Y9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1h3Q9Z0Y9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1h3Q9Z0Y9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Nr1h3Q9Z0Y9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1h3Q9Z0Y9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1h3Q9Z0Y9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1h3Q9Z0Y9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h3Q9Z0Y9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms