Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip2Q9Z0H8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip2Q9Z0H8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Gm7213-201ENSMUST00000215977 950 ntBASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clip2Q9Z0H8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Gm18958-201ENSMUST00000174258 762 ntBASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip2Q9Z0H8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip2Q9Z0H8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Gm23634-201ENSMUST00000175071 91 ntBASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Mir1668-201ENSMUST00000184114 107 ntBASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip2Q9Z0H8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms