Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Gm38027-201ENSMUST00000192315 235 ntBASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn3Q9Z0G9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Mir5122-201ENSMUST00000175004 89 ntBASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn3Q9Z0G9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn3Q9Z0G9 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.33■□□□□ 0.37
Cldn3Q9Z0G9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn3Q9Z0G9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn3Q9Z0G9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cldn3Q9Z0G9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.33■□□□□ 0.37
Cldn3Q9Z0G9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn3Q9Z0G9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn3Q9Z0G9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn3Q9Z0G9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Gm21814-202ENSMUST00000203277 873 ntBASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn3Q9Z0G9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn3Q9Z0G9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms