Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ClcnkaQ9WUB7 Gm10812-201ENSMUST00000099864 546 ntBASIC15.79■□□□□ 0.12
ClcnkaQ9WUB7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ClcnkaQ9WUB7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ClcnkaQ9WUB7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ClcnkaQ9WUB7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ClcnkaQ9WUB7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.79■□□□□ 0.12
ClcnkaQ9WUB7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ClcnkaQ9WUB7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ClcnkaQ9WUB7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.77■□□□□ 0.11
ClcnkaQ9WUB7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Mir1199-201ENSMUST00000117015 119 ntBASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.76■□□□□ 0.11
ClcnkaQ9WUB7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms