Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd2Q9R1A8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd2Q9R1A8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Gm44549-201ENSMUST00000208351 577 ntBASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Rab3c-203ENSMUST00000224180 967 ntBASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd2Q9R1A8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd2Q9R1A8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd2Q9R1A8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rfwd2Q9R1A8 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.64■□□□□ 0.42
Rfwd2Q9R1A8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd2Q9R1A8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd2Q9R1A8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Rfwd2Q9R1A8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd2Q9R1A8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd2Q9R1A8 Gm2399-201ENSMUST00000104944 225 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms