Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.98□□□□□ -0.01
Nubp1Q9R060 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.98□□□□□ -0.01
Nubp1Q9R060 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.98□□□□□ -0.01
Nubp1Q9R060 Gm42660-201ENSMUST00000197733 947 ntBASIC14.98□□□□□ -0.01
Nubp1Q9R060 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.98□□□□□ -0.01
Nubp1Q9R060 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Birc2-201ENSMUST00000054878 378 ntBASIC14.98□□□□□ -0.01
Nubp1Q9R060 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nubp1Q9R060 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Gm24841-201ENSMUST00000158676 357 ntBASIC14.97□□□□□ -0.01
Nubp1Q9R060 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Il3ra-202ENSMUST00000223589 738 ntBASIC14.97□□□□□ -0.01
Nubp1Q9R060 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.97□□□□□ -0.01
Nubp1Q9R060 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nubp1Q9R060 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.96□□□□□ -0.01
Nubp1Q9R060 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nubp1Q9R060 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Nubp1Q9R060 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nubp1Q9R060 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nubp1Q9R060 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nubp1Q9R060 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Nubp1Q9R060 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.95□□□□□ -0.02
Nubp1Q9R060 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nubp1Q9R060 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.94□□□□□ -0.02
Nubp1Q9R060 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nubp1Q9R060 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nubp1Q9R060 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms