Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a4Q9QZR9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Gm7506-201ENSMUST00000207758 815 ntBASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a4Q9QZR9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Gm13418-201ENSMUST00000119097 944 ntBASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Gm15590-201ENSMUST00000078419 552 ntBASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a4Q9QZR9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col4a4Q9QZR9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a4Q9QZR9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col4a4Q9QZR9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.21■□□□□ 0.34
Col4a4Q9QZR9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Gm44430-201ENSMUST00000203376 995 ntBASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 AV026068-213ENSMUST00000223675 1171 ntBASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a4Q9QZR9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms