Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm10812-201ENSMUST00000099864 546 ntBASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sec61a2Q9JLR1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sec61a2Q9JLR1 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.46■□□□□ 0.06
Sec61a2Q9JLR1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sec61a2Q9JLR1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sec61a2Q9JLR1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Sec61a2Q9JLR1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sec61a2Q9JLR1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Sec61a2Q9JLR1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Gm13401-201ENSMUST00000117074 291 ntBASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sec61a2Q9JLR1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Gm11643-201ENSMUST00000119578 864 ntBASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sec61a2Q9JLR1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms