Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tubb3Q9ERD7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Gm37055-201ENSMUST00000191866 133 ntBASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tubb3Q9ERD7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Gm18025-201ENSMUST00000221733 862 ntBASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tubb3Q9ERD7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubb3Q9ERD7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubb3Q9ERD7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubb3Q9ERD7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.02■□□□□ 0.32
Tubb3Q9ERD7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.02■□□□□ 0.32
Tubb3Q9ERD7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Tubb3Q9ERD7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubb3Q9ERD7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Tubb3Q9ERD7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.02■□□□□ 0.31
Tubb3Q9ERD7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tubb3Q9ERD7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tubb3Q9ERD7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Tubb3Q9ERD7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Gm43183-201ENSMUST00000200632 547 ntBASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Gm42545-201ENSMUST00000202755 922 ntBASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubb3Q9ERD7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17■□□□□ 0.31
Tubb3Q9ERD7 AC158538.1-201ENSMUST00000225870 294 ntBASIC17■□□□□ 0.31
Tubb3Q9ERD7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tubb3Q9ERD7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms