Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps35Q9EQH3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.16■□□□□ 0.34
Vps35Q9EQH3 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps35Q9EQH3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps35Q9EQH3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps35Q9EQH3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.13■□□□□ 0.33
Vps35Q9EQH3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps35Q9EQH3 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.12■□□□□ 0.33
Vps35Q9EQH3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms