Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Lonrf3Q9D4H7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Gm18032-201ENSMUST00000222541 538 ntBASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lonrf3Q9D4H7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lonrf3Q9D4H7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Gm6659-201ENSMUST00000174752 547 ntBASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lonrf3Q9D4H7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 Gm16061-201ENSMUST00000122167 857 ntBASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.83■□□□□ 0.77
Lonrf3Q9D4H7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.83■□□□□ 0.76
Lonrf3Q9D4H7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lonrf3Q9D4H7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.83■□□□□ 0.76
Lonrf3Q9D4H7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lonrf3Q9D4H7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lonrf3Q9D4H7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lonrf3Q9D4H7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lonrf3Q9D4H7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Gm22697-201ENSMUST00000175194 63 ntBASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Gm10566-201ENSMUST00000086739 996 ntBASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lonrf3Q9D4H7 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.81■□□□□ 0.76
Lonrf3Q9D4H7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lonrf3Q9D4H7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lonrf3Q9D4H7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lonrf3Q9D4H7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lonrf3Q9D4H7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Lonrf3Q9D4H7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Lonrf3Q9D4H7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Lonrf3Q9D4H7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms