Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Gm9731-201ENSMUST00000209480 747 ntBASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Gm3375-201ENSMUST00000203929 796 ntBASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp48Q9D361 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Il3ra-202ENSMUST00000223589 738 ntBASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snrnp48Q9D361 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snrnp48Q9D361 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Gm7638-201ENSMUST00000121348 967 ntBASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.09■□□□□ 0.33
Snrnp48Q9D361 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snrnp48Q9D361 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Snrnp48Q9D361 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snrnp48Q9D361 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snrnp48Q9D361 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Snrnp48Q9D361 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snrnp48Q9D361 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.08■□□□□ 0.33
Snrnp48Q9D361 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snrnp48Q9D361 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Snrnp48Q9D361 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms