Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Q9CYI0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.94■□□□□ 0.62
Q9CYI0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.94■□□□□ 0.62
Q9CYI0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Q9CYI0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CYI0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Q9CYI0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.93■□□□□ 0.62
Q9CYI0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.93■□□□□ 0.62
Q9CYI0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Q9CYI0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CYI0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.92■□□□□ 0.62
Q9CYI0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.92■□□□□ 0.62
Q9CYI0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.92■□□□□ 0.62
Q9CYI0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Q9CYI0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Gm6345-202ENSMUST00000180900 204 ntBASIC18.92■□□□□ 0.62
Q9CYI0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.92■□□□□ 0.62
Q9CYI0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CYI0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.91■□□□□ 0.62
Q9CYI0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Q9CYI0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.91■□□□□ 0.62
Q9CYI0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.91■□□□□ 0.62
Q9CYI0 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.91■□□□□ 0.62
Q9CYI0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.91■□□□□ 0.62
Q9CYI0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.91■□□□□ 0.62
Q9CYI0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CYI0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.9■□□□□ 0.62
Q9CYI0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Q9CYI0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.9■□□□□ 0.62
Q9CYI0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Q9CYI0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 Gm7370-201ENSMUST00000219471 767 ntBASIC18.9■□□□□ 0.62
Q9CYI0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 Gm7367-201ENSMUST00000057611 492 ntBASIC18.9■□□□□ 0.62
Q9CYI0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Q9CYI0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CYI0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.9■□□□□ 0.62
Q9CYI0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q9CYI0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.89■□□□□ 0.61
Q9CYI0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CYI0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CYI0 Gm25016-201ENSMUST00000158399 131 ntBASIC18.89■□□□□ 0.61
Q9CYI0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CYI0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CYI0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CYI0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CYI0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Q9CYI0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Q9CYI0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Q9CYI0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CYI0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.89■□□□□ 0.61
Q9CYI0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CYI0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CYI0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.88■□□□□ 0.61
Q9CYI0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CYI0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CYI0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Q9CYI0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CYI0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.88■□□□□ 0.61
Q9CYI0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Q9CYI0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Q9CYI0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CYI0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms