Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Gm27011-201ENSMUST00000182352 972 ntBASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Khdc3Q9CWU5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Gm4974-201ENSMUST00000209974 875 ntBASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Khdc3Q9CWU5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Khdc3Q9CWU5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Gm8520-201ENSMUST00000186517 868 ntBASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Khdc3Q9CWU5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Khdc3Q9CWU5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Khdc3Q9CWU5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms