Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.49■□□□□ 0.23
Msantd3Q9CR78 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msantd3Q9CR78 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msantd3Q9CR78 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Msantd3Q9CR78 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msantd3Q9CR78 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.49■□□□□ 0.23
Msantd3Q9CR78 Fst-202ENSMUST00000223640 2612 ntBASIC16.49■□□□□ 0.23
Msantd3Q9CR78 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msantd3Q9CR78 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msantd3Q9CR78 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Gm17807-201ENSMUST00000186869 298 ntBASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Gm17808-201ENSMUST00000200859 894 ntBASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msantd3Q9CR78 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msantd3Q9CR78 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.46■□□□□ 0.22
Msantd3Q9CR78 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Gm17971-201ENSMUST00000190239 806 ntBASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msantd3Q9CR78 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms