Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Gm12527-201ENSMUST00000117967 564 ntBASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc43Q9CR29 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc43Q9CR29 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc43Q9CR29 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc43Q9CR29 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc43Q9CR29 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.08■□□□□ 0.65
Ccdc43Q9CR29 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Ccdc43Q9CR29 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc43Q9CR29 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Gm13401-201ENSMUST00000117074 291 ntBASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc43Q9CR29 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Gm11643-201ENSMUST00000119578 864 ntBASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc43Q9CR29 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc43Q9CR29 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms