Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Gm5587-201ENSMUST00000206270 674 ntBASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61bQ9CQS8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Gm11355-201ENSMUST00000121120 306 ntBASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Gm7213-201ENSMUST00000215977 950 ntBASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 AC159205.3-201ENSMUST00000224614 874 ntBASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Gm42922-201ENSMUST00000195887 2078 ntBASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Gm9885-202ENSMUST00000186234 2209 ntBASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61bQ9CQS8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Gm7284-201ENSMUST00000131667 944 ntBASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sec61bQ9CQS8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Sec61bQ9CQS8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms