Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Gm9847-201ENSMUST00000052528 599 ntBASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mrpl54Q9CPW3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mrpl54Q9CPW3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Mrpl54Q9CPW3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mrpl54Q9CPW3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mrpl54Q9CPW3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Mrpl54Q9CPW3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mrpl54Q9CPW3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.27■□□□□ 0.03
Mrpl54Q9CPW3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Mrpl54Q9CPW3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Mrpl54Q9CPW3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mrpl54Q9CPW3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Gm13534-201ENSMUST00000121169 513 ntBASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mrpl54Q9CPW3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Mrpl54Q9CPW3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Mrpl54Q9CPW3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl54Q9CPW3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms